Journal: CNS Neuroscience & Therapeutics
Article Title: Targeting HDAC3 Suppresses Ferroptosis and Demyelination in White Matter Injury by Restoring PDK4‐Mediated Iron Homeostasis
doi: 10.1111/cns.70471
Figure Lengend Snippet: Inhibition of HDAC3 regulates iron metabolism in HDAC3‐PDK4 axis and improves ferroptosis by lipid peroxidation. (A) Representative western blot bands of ACSL4, xCT and GPX4 in sham, CPZ and RGFP966 intervention group. (B) Quantification of hepcidin antimicrobial peptide ( Hamp ) mRNA expression examined by quantitative real‐time PCR (qPCR) in white matter after RGFP966 intervention. (C) Fe 2+ expression in white matter after RGFP966 intervention. (D) Quantification of the transferrin (TF) levels by Enzyme‐Linked Immunosorbent Assay (ELISA) at 5 weeks CPZ‐modeling in CC region. n = 3–7. (E–G) Quantitative analysis of protein expression levels of ACSL4, xCT and GPX4 in CC region. n = 3–6. (H) Malondialdehyde (MDA) was detected in the CC region of mice. (I) Quantitative analysis of GSH expression levels in white matter of mouse in each group; (J) The activity level of superoxide dismutase (SOD) in the white matter of mouse in each group. n = 3–5. (K) CUT&Tag sequencing Reads enrichment map. The graph above shows the gene region in horizontal coordinates and the signal enrichment intensity in vertical coordinates. The following is a heat map. The horizontal coordinate represents 5 kb upstream and 5 kb downstream of the transcription initiation site (TSS), the vertical coordinate represents genes, and the color represents the coverage of reads at corresponding locations. The redder the color, the higher the coverage of reads at that location. (L) In the KEGG enrichment results of peak‐related genes, select the pathway with the most significant enrichment and show it in the figure. The enrichment of KEGG Pathway was measured by RichFactor, Qvalue and the number of genes enriched in this pathway. (M) Peak GO enrichment analysis of CPZ group and RGFP966 group. (N, O) KEGG analysis diagram and GO enrichment analysis of NCBI dataset GSE151306 . (P, Q) The top five genes with high logFC values among 38 intersection genes in NCBI dataset and ferroptosis gene dataset. (R–V) Quantification of PDK4, ENPP2, MLLT1, CDH1 and CDO1 mRNA expression examined by qPCR in the white matter of mouse after 5 weeks of demyelination. n = 3. (W–X) Quantification of CDH1 and PDK4 mRNA expression examined by qPCR in the CC region of mouse after 1 week of intervention with RGFP966. (Y) Reads expression of PDK4 in IGV visual CUT&Tag sequencing data. (Z) Quantification of the binding effect of HDAC3 and PDK4 expression examined by CUT&Tag‐qPCR after demyelination for 1 week. n = 3.
Article Snippet: Mouse transferrin (TF) levels were measured using a commercial enzyme‐linked immunosorbent assay (ELISA) kit (Elabscience, E‐EL‐M1184, Elabscience Biotechnology Co. Ltd., Wuhan, Hubei, China).
Techniques: Inhibition, Western Blot, Expressing, Real-time Polymerase Chain Reaction, Enzyme-linked Immunosorbent Assay, Activity Assay, Sequencing, Binding Assay